Dca53093.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold705)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53093.1 |
2 |
166 |
485 |
11.75 |
165 |
34 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
295 |
1717 |
9.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53093.1 |
204 |
296 |
485 |
7.01 |
93 |
37 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold705 |
Augustus |
mRNA |
18754 |
23591 |
. |
+ |
. |
ID=Dca53093.1;Parent=Dca53093 |
| scaffold705 |
Augustus |
exon |
18754 |
19010 |
. |
+ |
. |
ID=Dca53093.1.exon1;Parent=Dca53093.1 |
| scaffold705 |
Augustus |
exon |
21699 |
21910 |
. |
+ |
. |
ID=Dca53093.1.exon2;Parent=Dca53093.1 |
| scaffold705 |
Augustus |
exon |
22495 |
23091 |
. |
+ |
. |
ID=Dca53093.1.exon3;Parent=Dca53093.1 |
| scaffold705 |
Augustus |
exon |
23200 |
23591 |
. |
+ |
. |
ID=Dca53093.1.exon4;Parent=Dca53093.1 |
