Carnation DB

Dca53320.1

Annotation

6-exons
f-1
sp|F6HHI1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g00020#GO:0009523;GO:0015979;GO:0010027#0F2P1C
AT2G20890.1 | Symbols: PSB29, THF1 | photosystem II reaction center PSB29 protein | chr2:8987783-8989185 FORWARD LENGTH=300
Repeat List (scaffold711)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53320.1	1	268	268	71.64	268	65	4e-101
Target_name	Start	End	Length	Cov(%)
sp\|F6HHI1_VITVI	1	292	299	97.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53320.1	2	266	268	64.55	265	59	3e-88
Target_name	Start	End	Length	Cov(%)
AT2G20890.1	4	286	300	94.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold711	Augustus	mRNA	16050	19527	.	-	.	ID=Dca53320.1;Parent=Dca53320
scaffold711	Augustus	exon	16050	16128	.	-	.	ID=Dca53320.1.exon1;Parent=Dca53320.1
scaffold711	Augustus	exon	16254	16369	.	-	.	ID=Dca53320.1.exon2;Parent=Dca53320.1
scaffold711	Augustus	exon	16489	16705	.	-	.	ID=Dca53320.1.exon3;Parent=Dca53320.1
scaffold711	Augustus	exon	17625	17713	.	-	.	ID=Dca53320.1.exon4;Parent=Dca53320.1
scaffold711	Augustus	exon	17798	17892	.	-	.	ID=Dca53320.1.exon5;Parent=Dca53320.1
scaffold711	Augustus	exon	19317	19527	.	-	.	ID=Dca53320.1.exon6;Parent=Dca53320.1