Carnation DB

Dca53386.1

Annotation

8-exons
f-1
sp|B9MZ75_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827287#GO:0005524;GO:0042026#1F1P0C
AT2G28000.1 | Symbols: CPN60A, CH-CPN60A, SLP | chaperonin-60alpha | chr2:11926603-11929184 FORWARD LENGTH=586
Repeat List (scaffold713)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53386.1	1	582	585	85.47	582	86	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MZ75_POPTR	1	583	587	99.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53386.1	12	585	585	82.05	574	84	0
Target_name	Start	End	Length	Cov(%)
AT2G28000.1	12	586	586	98.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold713	Augus-PASA	mRNA	43314	47215	.	-	.	ID=Dca53386.1;Parent=Dca53386
scaffold713	Augus-PASA	exon	43314	43601	.	-	.	ID=Dca53386.1.exon1;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	43691	44142	.	-	.	ID=Dca53386.1.exon2;Parent=Dca53386.1
scaffold713	Augustus	exon	44820	45126	.	-	.	ID=Dca53386.1.exon3;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	45212	45357	.	-	.	ID=Dca53386.1.exon4;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	45468	45675	.	-	.	ID=Dca53386.1.exon5;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	45799	45920	.	-	.	ID=Dca53386.1.exon6;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	46392	46572	.	-	.	ID=Dca53386.1.exon7;Parent=Dca53386.1
scaffold713	Augus-PASA	exon	47162	47215	.	-	.	ID=Dca53386.1.exon8;Parent=Dca53386.1