Dca5342.1
Annotation
- 4-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1203)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5342.1 |
2 |
888 |
949 |
34.66 |
887 |
36 |
3e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
108 |
1033 |
1114 |
83.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5342.1 |
2 |
799 |
949 |
26.87 |
798 |
31 |
5e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
31 |
856 |
857 |
96.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1203 |
Augustus |
mRNA |
106835 |
111148 |
. |
+ |
. |
ID=Dca5342.1;Parent=Dca5342 |
| scaffold1203 |
Augustus |
exon |
106835 |
107638 |
. |
+ |
. |
ID=Dca5342.1.exon1;Parent=Dca5342.1 |
| scaffold1203 |
Augustus |
exon |
107755 |
109617 |
. |
+ |
. |
ID=Dca5342.1.exon2;Parent=Dca5342.1 |
| scaffold1203 |
Augustus |
exon |
110880 |
110960 |
. |
+ |
. |
ID=Dca5342.1.exon3;Parent=Dca5342.1 |
| scaffold1203 |
Augustus |
exon |
111047 |
111148 |
. |
+ |
. |
ID=Dca5342.1.exon4;Parent=Dca5342.1 |
