Carnation DB

Dca53554.1

Annotation

11-exons
f-1
sp|D7U8I2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0032g00090#GO:0005663;GO:0005524;GO:0003689;GO:0006260#2F1P1C
AT5G27740.1 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase family associated with various cellular activities (AAA) | chr5:9823831-9826869 FORWARD LENGTH=354
Repeat List (scaffold718)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53554.1	1	354	354	87.85	354	88	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U8I2_VITVI	1	354	354	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53554.1	1	354	354	83.61	354	84	0
Target_name	Start	End	Length	Cov(%)
AT5G27740.1	1	354	354	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold718	Augus-PASA	mRNA	62999	71314	.	-	.	ID=Dca53554.1;Parent=Dca53554
scaffold718	Augus-PASA	exon	62999	63057	.	-	.	ID=Dca53554.1.exon1;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	63757	63802	.	-	.	ID=Dca53554.1.exon2;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	65257	65331	.	-	.	ID=Dca53554.1.exon3;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	65426	65495	.	-	.	ID=Dca53554.1.exon4;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	66418	66516	.	-	.	ID=Dca53554.1.exon5;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	67104	67240	.	-	.	ID=Dca53554.1.exon6;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	67628	67809	.	-	.	ID=Dca53554.1.exon7;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	68116	68284	.	-	.	ID=Dca53554.1.exon8;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	69385	69417	.	-	.	ID=Dca53554.1.exon9;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	71009	71119	.	-	.	ID=Dca53554.1.exon10;Parent=Dca53554.1
scaffold718	Augus-PASA	exon	71231	71314	.	-	.	ID=Dca53554.1.exon11;Parent=Dca53554.1