Carnation DB

Dca53562.1

Annotation

6-exons
f-1
sp|B9HMD0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_420512#unknown#0F0P0C
sp|B7EB72_ORYSJ#cDNA clone:J013035L06, full insert sequence#Oryza sativa subsp japonica (Rice)#unknown#unknown#0F0P0C
Repeat List (scaffold7181)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53562.1	1	166	175	78.28	166	83	2e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9HMD0_POPTR	16	181	286	58.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53562.1	1	166	175	77.14	166	82	1e-77
Target_name	Start	End	Length	Cov(%)
Os07t0211800-02	15	180	286	58.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7181	Augustus	mRNA	3802	9502	.	-	.	ID=Dca53562.1;Parent=Dca53562
scaffold7181	Augustus	exon	3802	3835	.	-	.	ID=Dca53562.1.exon1;Parent=Dca53562.1
scaffold7181	Augustus	exon	4601	4746	.	-	.	ID=Dca53562.1.exon2;Parent=Dca53562.1
scaffold7181	Augustus	exon	5439	5504	.	-	.	ID=Dca53562.1.exon3;Parent=Dca53562.1
scaffold7181	Augustus	exon	5720	5812	.	-	.	ID=Dca53562.1.exon4;Parent=Dca53562.1
scaffold7181	Augustus	exon	8206	8311	.	-	.	ID=Dca53562.1.exon5;Parent=Dca53562.1
scaffold7181	Augustus	exon	9420	9502	.	-	.	ID=Dca53562.1.exon6;Parent=Dca53562.1