Carnation DB

Dca53585.1

Annotation

6-exons
f-1
sp|D7M2N7_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_490219#GO:0005634;GO:0005488;GO:0000398#1F1P1C
AT4G03430.1 | Symbols: STA1, EMB2770 | pre-mRNA splicing factor-related | chr4:1517411-1520500 REVERSE LENGTH=1029
Repeat List (scaffold719)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53585.1	3	394	546	39.92	392	50	1e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7M2N7_ARALL	518	959	1004	44.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53585.1	3	394	546	40.1	392	49	2e-110
Target_name	Start	End	Length	Cov(%)
AT4G03430.1	536	984	1029	43.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold719	Augustus	mRNA	19241	25562	.	+	.	ID=Dca53585.1;Parent=Dca53585
scaffold719	Augustus	exon	19241	19741	.	+	.	ID=Dca53585.1.exon1;Parent=Dca53585.1
scaffold719	Augustus	exon	19844	20164	.	+	.	ID=Dca53585.1.exon2;Parent=Dca53585.1
scaffold719	Augustus	exon	20237	20580	.	+	.	ID=Dca53585.1.exon3;Parent=Dca53585.1
scaffold719	Augustus	exon	21245	21346	.	+	.	ID=Dca53585.1.exon4;Parent=Dca53585.1
scaffold719	Augustus	exon	21608	21723	.	+	.	ID=Dca53585.1.exon5;Parent=Dca53585.1
scaffold719	Augustus	exon	25306	25562	.	+	.	ID=Dca53585.1.exon6;Parent=Dca53585.1