Carnation DB

Dca53657.1

Annotation

5-exons
f-1
sp|F6HMM7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g01420#GO:0000175;GO:0004654;GO:0003723;GO:0006402;GO:0006396#3F2P0C
Os07t0168000-01 Similar to Polyribonucleotide phophorylase (Fragment).
Repeat List (scaffold7201)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53657.1	1	197	197	63.45	197	57	2e-55
Target_name	Start	End	Length	Cov(%)
sp\|F6HMM7_VITVI	653	874	903	24.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53657.1	1	144	197	52.28	144	64	1e-51
Target_name	Start	End	Length	Cov(%)
Os07t0168000-01	707	868	903	17.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7201	Augustus	mRNA	25352	27019	.	+	.	ID=Dca53657.1;Parent=Dca53657
scaffold7201	Augustus	exon	25352	25438	.	+	.	ID=Dca53657.1.exon1;Parent=Dca53657.1
scaffold7201	Augustus	exon	25530	25624	.	+	.	ID=Dca53657.1.exon2;Parent=Dca53657.1
scaffold7201	Augustus	exon	25994	26057	.	+	.	ID=Dca53657.1.exon3;Parent=Dca53657.1
scaffold7201	Augustus	exon	26503	26544	.	+	.	ID=Dca53657.1.exon4;Parent=Dca53657.1
scaffold7201	Augustus	exon	26714	27019	.	+	.	ID=Dca53657.1.exon5;Parent=Dca53657.1