Dca53682.1
Annotation
- 2-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold721)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53682.1 |
1 |
217 |
219 |
58.44 |
217 |
52 |
6e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
939 |
1184 |
1184 |
20.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53682.1 |
27 |
202 |
219 |
27.85 |
176 |
30 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1382 |
1401 |
14.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold721 |
Augustus |
mRNA |
106047 |
106786 |
. |
- |
. |
ID=Dca53682.1;Parent=Dca53682 |
| scaffold721 |
Augustus |
exon |
106047 |
106272 |
. |
- |
. |
ID=Dca53682.1.exon1;Parent=Dca53682.1 |
| scaffold721 |
Augustus |
exon |
106353 |
106786 |
. |
- |
. |
ID=Dca53682.1.exon2;Parent=Dca53682.1 |
