Dca53701.1
Annotation
- 3-exons
- f-1
- sp|A5CBM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001478#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold722)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53701.1 |
28 |
1181 |
1207 |
44.9 |
1154 |
44 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBM0_VITVI |
152 |
1349 |
1354 |
88.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53701.1 |
369 |
539 |
1207 |
4.63 |
171 |
33 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
590 |
762 |
1401 |
12.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold722 |
Augustus |
mRNA |
630 |
4958 |
. |
+ |
. |
ID=Dca53701.1;Parent=Dca53701 |
| scaffold722 |
Augustus |
exon |
630 |
1734 |
. |
+ |
. |
ID=Dca53701.1.exon1;Parent=Dca53701.1 |
| scaffold722 |
Augustus |
exon |
2353 |
3779 |
. |
+ |
. |
ID=Dca53701.1.exon2;Parent=Dca53701.1 |
| scaffold722 |
Augustus |
exon |
3867 |
4958 |
. |
+ |
. |
ID=Dca53701.1.exon3;Parent=Dca53701.1 |
