Carnation DB

Dca53707.1

Annotation

8-exons
f-1
sp|F6HHF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0080g00470#GO:0003676;GO:0000166#2F0P0C
sp|B9SWF3_RICCO#Nucleolar phosphoprotein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0292800#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold722)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53707.1	1	516	516	61.24	516	61	5e-152
Target_name	Start	End	Length	Cov(%)
sp\|F6HHF8_VITVI	1	503	503	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53707.1	73	516	516	42.82	444	48	8e-116
Target_name	Start	End	Length	Cov(%)
AT4G00830.1	52	495	495	89.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold722	Augus-PASA	mRNA	95043	99458	.	+	.	ID=Dca53707.1;Parent=Dca53707
scaffold722	Augus-PASA	exon	95043	95546	.	+	.	ID=Dca53707.1.exon1;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	95641	95757	.	+	.	ID=Dca53707.1.exon2;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	96123	96263	.	+	.	ID=Dca53707.1.exon3;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	96370	96543	.	+	.	ID=Dca53707.1.exon4;Parent=Dca53707.1
scaffold722	Augustus	exon	96700	96907	.	+	.	ID=Dca53707.1.exon5;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	97017	97192	.	+	.	ID=Dca53707.1.exon6;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	98647	98735	.	+	.	ID=Dca53707.1.exon7;Parent=Dca53707.1
scaffold722	Augus-PASA	exon	99317	99458	.	+	.	ID=Dca53707.1.exon8;Parent=Dca53707.1