Dca53784.1
Annotation
- 3-exons
- f-1
- sp|O81068_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g28980#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold7245)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53784.1 |
1 |
212 |
275 |
30.18 |
212 |
40 |
8e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81068_ARATH |
968 |
1179 |
1529 |
13.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53784.1 |
13 |
208 |
275 |
21.09 |
196 |
30 |
4e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
193 |
386 |
644 |
30.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7245 |
Augustus |
mRNA |
9439 |
13122 |
. |
+ |
. |
ID=Dca53784.1;Parent=Dca53784 |
| scaffold7245 |
Augustus |
exon |
9439 |
10045 |
. |
+ |
. |
ID=Dca53784.1.exon1;Parent=Dca53784.1 |
| scaffold7245 |
Augustus |
exon |
10184 |
10300 |
. |
+ |
. |
ID=Dca53784.1.exon2;Parent=Dca53784.1 |
| scaffold7245 |
Augustus |
exon |
13019 |
13122 |
. |
+ |
. |
ID=Dca53784.1.exon3;Parent=Dca53784.1 |
