Carnation DB

Dca53832.1

Annotation

6-exons
f-1
sp|B9HE22_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561734#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold726)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53832.1	44	258	434	30.87	215	53	9e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9HE22_POPTR	343	592	609	41.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53832.1	46	258	434	30.18	213	53	1e-62
Target_name	Start	End	Length	Cov(%)
Os01t0198200-03	80	326	344	71.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold726	Augustus	mRNA	49408	53544	.	+	.	ID=Dca53832.1;Parent=Dca53832
scaffold726	Augustus	exon	49408	49539	.	+	.	ID=Dca53832.1.exon1;Parent=Dca53832.1
scaffold726	Augustus	exon	50235	50365	.	+	.	ID=Dca53832.1.exon2;Parent=Dca53832.1
scaffold726	Augustus	exon	50463	50620	.	+	.	ID=Dca53832.1.exon3;Parent=Dca53832.1
scaffold726	Augustus	exon	50993	51150	.	+	.	ID=Dca53832.1.exon4;Parent=Dca53832.1
scaffold726	Augustus	exon	51315	51503	.	+	.	ID=Dca53832.1.exon5;Parent=Dca53832.1
scaffold726	Augustus	exon	53008	53544	.	+	.	ID=Dca53832.1.exon6;Parent=Dca53832.1