Dca53849.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7266)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53849.1 |
1 |
175 |
214 |
53.73 |
175 |
55 |
3e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
859 |
896 |
23.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53849.1 |
27 |
182 |
214 |
28.97 |
156 |
33 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1366 |
1401 |
13.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7266 |
Augustus |
mRNA |
10692 |
14635 |
. |
- |
. |
ID=Dca53849.1;Parent=Dca53849 |
| scaffold7266 |
Augustus |
exon |
10692 |
10811 |
. |
- |
. |
ID=Dca53849.1.exon1;Parent=Dca53849.1 |
| scaffold7266 |
Augustus |
exon |
14000 |
14346 |
. |
- |
. |
ID=Dca53849.1.exon2;Parent=Dca53849.1 |
| scaffold7266 |
Augustus |
exon |
14458 |
14635 |
. |
- |
. |
ID=Dca53849.1.exon3;Parent=Dca53849.1 |
