Carnation DB

Dca53935.1

Annotation

5-exons
f-1
sp|F6GTP6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g03210#GO:0008270#1F0P0C
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:27739366-27741161 REVERSE LENGTH=367
Repeat List (scaffold7293)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53935.1	13	178	178	55.61	166	57	2e-54
Target_name	Start	End	Length	Cov(%)
sp\|F6GTP6_VITVI	196	370	371	47.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53935.1	14	175	178	45.5	162	50	4e-41
Target_name	Start	End	Length	Cov(%)
AT1G73760.1	202	363	367	44.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7293	Augustus	mRNA	11365	14606	.	+	.	ID=Dca53935.1;Parent=Dca53935
scaffold7293	Augustus	exon	11365	11385	.	+	.	ID=Dca53935.1.exon1;Parent=Dca53935.1
scaffold7293	Augustus	exon	11774	11929	.	+	.	ID=Dca53935.1.exon2;Parent=Dca53935.1
scaffold7293	Augustus	exon	13833	13931	.	+	.	ID=Dca53935.1.exon3;Parent=Dca53935.1
scaffold7293	Augustus	exon	14058	14186	.	+	.	ID=Dca53935.1.exon4;Parent=Dca53935.1
scaffold7293	Augustus	exon	14475	14606	.	+	.	ID=Dca53935.1.exon5;Parent=Dca53935.1