Carnation DB

Dca54038.1

Annotation

7-exons
f-1
sp|B9GVK7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_647169#GO:0051537;GO:0009055;GO:0046872#3F0P0C
Os09t0437900-01 Similar to Adrenodoxin.
Repeat List (scaffold7306)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54038.1	1	176	178	49.43	176	47	2e-41
Target_name	Start	End	Length	Cov(%)
sp\|B9GVK7_POPTR	1	188	198	94.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54038.1	2	176	178	44.94	175	46	4e-40
Target_name	Start	End	Length	Cov(%)
Os09t0437900-01	1	171	182	93.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7306	Augustus	mRNA	486	5420	.	+	.	ID=Dca54038.1;Parent=Dca54038
scaffold7306	Augustus	exon	486	543	.	+	.	ID=Dca54038.1.exon1;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	1464	1543	.	+	.	ID=Dca54038.1.exon2;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	2523	2590	.	+	.	ID=Dca54038.1.exon3;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	2864	2970	.	+	.	ID=Dca54038.1.exon4;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	5002	5051	.	+	.	ID=Dca54038.1.exon5;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	5163	5245	.	+	.	ID=Dca54038.1.exon6;Parent=Dca54038.1
scaffold7306	Augus-PASA	exon	5330	5420	.	+	.	ID=Dca54038.1.exon7;Parent=Dca54038.1