Dca54241.1
Annotation
- 3-exons
- f-1
- sp|Q9ZUF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05980#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold7375)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54241.1 |
8 |
796 |
1063 |
25.39 |
789 |
33 |
1e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUF0_ARATH |
292 |
1089 |
1352 |
59.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54241.1 |
73 |
216 |
1063 |
4.23 |
144 |
31 |
9e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
43 |
189 |
857 |
17.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7375 |
Augustus |
mRNA |
7246 |
11284 |
. |
- |
. |
ID=Dca54241.1;Parent=Dca54241 |
| scaffold7375 |
Augustus |
exon |
7246 |
8018 |
. |
- |
. |
ID=Dca54241.1.exon1;Parent=Dca54241.1 |
| scaffold7375 |
Augustus |
exon |
8777 |
10521 |
. |
- |
. |
ID=Dca54241.1.exon2;Parent=Dca54241.1 |
| scaffold7375 |
Augustus |
exon |
10611 |
11284 |
. |
- |
. |
ID=Dca54241.1.exon3;Parent=Dca54241.1 |
