Dca54260.1
Annotation
- 3-exons
- f-1
- sp|A5CAK5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_011481#unknown#0F0P0C
- sp|Q9C8F4_ARATH#Ty1/copia-element polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T15P17.15#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold738)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54260.1 |
10 |
144 |
449 |
14.69 |
135 |
49 |
9e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CAK5_VITVI |
3 |
134 |
154 |
85.71 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54260.1 |
23 |
143 |
449 |
9.35 |
121 |
34 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
16 |
134 |
237 |
50.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold738 |
Augustus |
mRNA |
99229 |
104601 |
. |
+ |
. |
ID=Dca54260.1;Parent=Dca54260 |
| scaffold738 |
Augustus |
exon |
99229 |
99664 |
. |
+ |
. |
ID=Dca54260.1.exon1;Parent=Dca54260.1 |
| scaffold738 |
Augustus |
exon |
101529 |
101777 |
. |
+ |
. |
ID=Dca54260.1.exon2;Parent=Dca54260.1 |
| scaffold738 |
Augustus |
exon |
103937 |
104601 |
. |
+ |
. |
ID=Dca54260.1.exon3;Parent=Dca54260.1 |
