Dca54302.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold7393)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54302.1 |
59 |
400 |
565 |
46.01 |
342 |
70 |
6e-157
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
1338 |
1709 |
1717 |
21.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54302.1 |
91 |
145 |
565 |
6.9 |
55 |
71 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
89 |
119 |
46.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7393 |
Augustus |
mRNA |
11431 |
13973 |
. |
- |
. |
ID=Dca54302.1;Parent=Dca54302 |
| scaffold7393 |
Augustus |
exon |
11431 |
11937 |
. |
- |
. |
ID=Dca54302.1.exon1;Parent=Dca54302.1 |
| scaffold7393 |
Augustus |
exon |
12692 |
12891 |
. |
- |
. |
ID=Dca54302.1.exon2;Parent=Dca54302.1 |
| scaffold7393 |
Augustus |
exon |
12983 |
13973 |
. |
- |
. |
ID=Dca54302.1.exon3;Parent=Dca54302.1 |
