Carnation DB

Dca54450.1

Annotation

7-exons
f-1
sp|D7TJM9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g01440#unknown#0F0P0C
Os01t0759700-02 Similar to transcription regulator.
Repeat List (scaffold743)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54450.1	48	286	286	56.64	239	68	1e-88
Target_name	Start	End	Length	Cov(%)
sp\|D7TJM9_VITVI	177	402	402	56.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54450.1	13	286	286	51.04	274	52	5e-70
Target_name	Start	End	Length	Cov(%)
Os01t0759700-02	173	443	444	61.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold743	Augustus	mRNA	66241	72425	.	-	.	ID=Dca54450.1;Parent=Dca54450
scaffold743	Augustus	exon	66241	66307	.	-	.	ID=Dca54450.1.exon1;Parent=Dca54450.1
scaffold743	Augustus	exon	69917	70032	.	-	.	ID=Dca54450.1.exon2;Parent=Dca54450.1
scaffold743	Augustus	exon	70127	70224	.	-	.	ID=Dca54450.1.exon3;Parent=Dca54450.1
scaffold743	Augustus	exon	70321	70452	.	-	.	ID=Dca54450.1.exon4;Parent=Dca54450.1
scaffold743	Augustus	exon	70858	71059	.	-	.	ID=Dca54450.1.exon5;Parent=Dca54450.1
scaffold743	Augustus	exon	71783	72021	.	-	.	ID=Dca54450.1.exon6;Parent=Dca54450.1
scaffold743	Augustus	exon	72419	72425	.	-	.	ID=Dca54450.1.exon7;Parent=Dca54450.1