Carnation DB

Dca54489.1

Annotation

3-exons
f-1
sp|B9SHB5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0528610#unknown#0F0P0C
Repeat List (scaffold7443)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54489.1	1	105	105	52.38	105	51	5e-16
Target_name	Start	End	Length	Cov(%)
sp\|B9SHB5_RICCO	1	104	104	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54489.1	36	105	105	39.04	70	58	1e-12
Target_name	Start	End	Length	Cov(%)
Os01t0738000-01	37	102	103	64.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7443	Augustus	mRNA	6018	8942	.	-	.	ID=Dca54489.1;Parent=Dca54489
scaffold7443	Augustus	exon	6018	6037	.	-	.	ID=Dca54489.1.exon1;Parent=Dca54489.1
scaffold7443	Augustus	exon	7488	7606	.	-	.	ID=Dca54489.1.exon2;Parent=Dca54489.1
scaffold7443	Augustus	exon	8764	8942	.	-	.	ID=Dca54489.1.exon3;Parent=Dca54489.1
scaffold7443	Augustus	mRNA	6891	8942	.	-	.	ID=Dca54489.2;Parent=Dca54489
scaffold7443	Augustus	exon	6891	6913	.	-	.	ID=Dca54489.2.exon1;Parent=Dca54489.2
scaffold7443	Augustus	exon	7488	7606	.	-	.	ID=Dca54489.2.exon2;Parent=Dca54489.2
scaffold7443	Augustus	exon	8764	8942	.	-	.	ID=Dca54489.2.exon3;Parent=Dca54489.2