Carnation DB

Dca54931.1

Annotation

7-exons
f-1
sp|G7J4X5_MEDTR#RING finger protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g088100#GO:0008270#1F0P0C
Repeat List (scaffold758)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54931.1	10	215	215	47.44	206	47	4e-40
Target_name	Start	End	Length	Cov(%)
sp\|G7J4X5_MEDTR	2	211	211	99.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54931.1	110	206	215	26.04	97	58	7e-29
Target_name	Start	End	Length	Cov(%)
Os08t0548300-01	201	297	306	31.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold758	Augus-PASA	mRNA	90946	92353	.	+	.	ID=Dca54931.1;Parent=Dca54931
scaffold758	Augus-PASA	exon	90946	91071	.	+	.	ID=Dca54931.1.exon1;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	91178	91307	.	+	.	ID=Dca54931.1.exon2;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	91427	91488	.	+	.	ID=Dca54931.1.exon3;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	91590	91631	.	+	.	ID=Dca54931.1.exon4;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	91708	91829	.	+	.	ID=Dca54931.1.exon5;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	92082	92190	.	+	.	ID=Dca54931.1.exon6;Parent=Dca54931.1
scaffold758	Augus-PASA	exon	92297	92353	.	+	.	ID=Dca54931.1.exon7;Parent=Dca54931.1