Carnation DB

Dca54939.1

Annotation

6-exons
f-1
sp|A5BJW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008825#GO:0008270#1F0P0C
AT1G48120.1 | Symbols: | hydrolases;protein serine/threonine phosphatases | chr1:17774238-17779624 REVERSE LENGTH=1340
Repeat List (scaffold7583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54939.1	163	378	498	16.86	216	34	6e-30
Target_name	Start	End	Length	Cov(%)
sp\|A5BJW1_VITVI	823	1071	1436	17.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54939.1	163	375	498	17.26	213	34	3e-31
Target_name	Start	End	Length	Cov(%)
AT1G48120.1	151	402	1340	18.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7583	Augustus	mRNA	9975	12576	.	-	.	ID=Dca54939.1;Parent=Dca54939
scaffold7583	Augustus	exon	9975	10274	.	-	.	ID=Dca54939.1.exon1;Parent=Dca54939.1
scaffold7583	Augustus	exon	10397	10477	.	-	.	ID=Dca54939.1.exon2;Parent=Dca54939.1
scaffold7583	Augustus	exon	10595	11025	.	-	.	ID=Dca54939.1.exon3;Parent=Dca54939.1
scaffold7583	Augustus	exon	11180	11457	.	-	.	ID=Dca54939.1.exon4;Parent=Dca54939.1
scaffold7583	Augustus	exon	11613	11790	.	-	.	ID=Dca54939.1.exon5;Parent=Dca54939.1
scaffold7583	Augustus	exon	12348	12576	.	-	.	ID=Dca54939.1.exon6;Parent=Dca54939.1