Carnation DB

Dca5504.1

Annotation

5-exons
f-1
sp|D7THI8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g00940#unknown#0F0P0C
sp|B9T627_RICCO#Basic helix-loop-helix-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0306990#unknown#0F0P0C
Repeat List (scaffold1210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5504.1	1	178	518	13.51	178	37	6e-23
Target_name	Start	End	Length	Cov(%)
sp\|D7THI8_VITVI	1	179	720	24.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5504.1	6	186	518	10.81	181	31	6e-15
Target_name	Start	End	Length	Cov(%)
AT2G27230.1	5	166	650	24.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1210	Augustus	mRNA	73022	74933	.	-	.	ID=Dca5504.1;Parent=Dca5504
scaffold1210	Augustus	exon	73022	74143	.	-	.	ID=Dca5504.1.exon1;Parent=Dca5504.1
scaffold1210	Augustus	exon	74230	74274	.	-	.	ID=Dca5504.1.exon2;Parent=Dca5504.1
scaffold1210	Augustus	exon	74353	74440	.	-	.	ID=Dca5504.1.exon3;Parent=Dca5504.1
scaffold1210	Augustus	exon	74544	74744	.	-	.	ID=Dca5504.1.exon4;Parent=Dca5504.1
scaffold1210	Augustus	exon	74833	74933	.	-	.	ID=Dca5504.1.exon5;Parent=Dca5504.1