Dca5538.1
Annotation
- 3-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os06t0271500-01 Transposon, En/Spm-like domain containing protein.
- Repeat List (scaffold12117)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5538.1 |
2 |
157 |
286 |
39.16 |
156 |
56 |
7e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
572 |
772 |
1717 |
11.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5538.1 |
206 |
270 |
286 |
8.39 |
65 |
37 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0271500-01 |
252 |
317 |
349 |
18.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12117 |
Augustus |
mRNA |
81 |
2501 |
. |
+ |
. |
ID=Dca5538.1;Parent=Dca5538 |
| scaffold12117 |
Augustus |
exon |
81 |
190 |
. |
+ |
. |
ID=Dca5538.1.exon1;Parent=Dca5538.1 |
| scaffold12117 |
Augustus |
exon |
315 |
810 |
. |
+ |
. |
ID=Dca5538.1.exon2;Parent=Dca5538.1 |
| scaffold12117 |
Augustus |
exon |
2245 |
2501 |
. |
+ |
. |
ID=Dca5538.1.exon3;Parent=Dca5538.1 |
