Dca5541.1
Annotation
- 4-exons
- f-1
- sp|B9I1E0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568625#unknown#0F0P0C
- Repeat List (scaffold12119)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5541.1 |
1 |
87 |
88 |
85.22 |
87 |
87 |
4e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I1E0_POPTR |
70 |
156 |
157 |
55.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5541.1 |
1 |
86 |
88 |
81.81 |
86 |
84 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0631100-02 |
1 |
86 |
90 |
95.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12119 |
Augustus |
mRNA |
1885 |
2561 |
. |
- |
. |
ID=Dca5541.1;Parent=Dca5541 |
| scaffold12119 |
Augustus |
exon |
1885 |
1945 |
. |
- |
. |
ID=Dca5541.1.exon1;Parent=Dca5541.1 |
| scaffold12119 |
Augustus |
exon |
2043 |
2064 |
. |
- |
. |
ID=Dca5541.1.exon2;Parent=Dca5541.1 |
| scaffold12119 |
Augustus |
exon |
2255 |
2325 |
. |
- |
. |
ID=Dca5541.1.exon3;Parent=Dca5541.1 |
| scaffold12119 |
Augustus |
exon |
2449 |
2561 |
. |
- |
. |
ID=Dca5541.1.exon4;Parent=Dca5541.1 |
