Dca5543.1
Annotation
- 2-exons
- f-1
- sp|A5B6A5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041904#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1212)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5543.1 |
4 |
565 |
565 |
43.71 |
562 |
40 |
4e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B6A5_VITVI |
280 |
864 |
1633 |
35.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5543.1 |
339 |
560 |
565 |
12.92 |
222 |
33 |
5e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
213 |
430 |
707 |
30.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1212 |
Augustus |
mRNA |
13776 |
15679 |
. |
- |
. |
ID=Dca5543.1;Parent=Dca5543 |
| scaffold1212 |
Augustus |
exon |
13776 |
14611 |
. |
- |
. |
ID=Dca5543.1.exon1;Parent=Dca5543.1 |
| scaffold1212 |
Augustus |
exon |
14818 |
15679 |
. |
- |
. |
ID=Dca5543.1.exon2;Parent=Dca5543.1 |
