Carnation DB

Dca55563.1

Annotation

5-exons
f-1
sp|F6HIF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01400#GO:0004725#1F0P0C
sp|G7JKG2_MEDTR#Tyrosine specific protein phosphatase family protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g132810#GO:0004725#1F0P0C
Repeat List (scaffold775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55563.1	1	195	196	69.89	195	66	1e-74
Target_name	Start	End	Length	Cov(%)
sp\|F6HIF1_VITVI	1	210	210	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55563.1	33	195	196	59.69	163	72	4e-70
Target_name	Start	End	Length	Cov(%)
AT4G03960.1	29	191	198	82.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold775	Augus-PASA	mRNA	181202	183531	.	+	.	ID=Dca55563.1;Parent=Dca55563
scaffold775	Augus-PASA	exon	181202	181407	.	+	.	ID=Dca55563.1.exon1;Parent=Dca55563.1
scaffold775	Augus-PASA	exon	181532	181625	.	+	.	ID=Dca55563.1.exon2;Parent=Dca55563.1
scaffold775	Augus-PASA	exon	183098	183155	.	+	.	ID=Dca55563.1.exon3;Parent=Dca55563.1
scaffold775	Augus-PASA	exon	183226	183269	.	+	.	ID=Dca55563.1.exon4;Parent=Dca55563.1
scaffold775	Augus-PASA	exon	183343	183531	.	+	.	ID=Dca55563.1.exon5;Parent=Dca55563.1