Carnation DB

Dca55588.1

Annotation

6-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Repeat List (scaffold776)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55588.1	153	1074	1888	24.57	922	49	0
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1	936	1553	60.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55588.1	519	1074	1888	11.22	556	38	5e-99
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	401	929	1539	34.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold776	Augustus	mRNA	7051	15463	.	-	.	ID=Dca55588.1;Parent=Dca55588
scaffold776	Augustus	exon	7051	7178	.	-	.	ID=Dca55588.1.exon1;Parent=Dca55588.1
scaffold776	Augustus	exon	7487	9788	.	-	.	ID=Dca55588.1.exon2;Parent=Dca55588.1
scaffold776	Augustus	exon	9877	12657	.	-	.	ID=Dca55588.1.exon3;Parent=Dca55588.1
scaffold776	Augustus	exon	13465	13602	.	-	.	ID=Dca55588.1.exon4;Parent=Dca55588.1
scaffold776	Augustus	exon	14960	15102	.	-	.	ID=Dca55588.1.exon5;Parent=Dca55588.1
scaffold776	Augustus	exon	15289	15463	.	-	.	ID=Dca55588.1.exon6;Parent=Dca55588.1