Carnation DB

Dca55589.1

Annotation

9-exons
f-1
sp|B9HY66_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_725740#unknown#0F0P0C
AT5G19070.1 | Symbols: | SNARE associated Golgi protein family | chr5:6375569-6377470 FORWARD LENGTH=280
Repeat List (scaffold776)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55589.1	3	273	273	71.06	271	72	2e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9HY66_POPTR	4	275	275	98.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55589.1	1	268	273	66.3	268	67	1e-95
Target_name	Start	End	Length	Cov(%)
AT5G19070.1	1	271	280	96.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold776	Augus-PASA	mRNA	48702	55891	.	-	.	ID=Dca55589.1;Parent=Dca55589
scaffold776	Augus-PASA	exon	48702	48883	.	-	.	ID=Dca55589.1.exon1;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	49329	49359	.	-	.	ID=Dca55589.1.exon2;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	49931	50023	.	-	.	ID=Dca55589.1.exon3;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	50687	50803	.	-	.	ID=Dca55589.1.exon4;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	51835	51921	.	-	.	ID=Dca55589.1.exon5;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	52465	52563	.	-	.	ID=Dca55589.1.exon6;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	53886	53940	.	-	.	ID=Dca55589.1.exon7;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	54822	54883	.	-	.	ID=Dca55589.1.exon8;Parent=Dca55589.1
scaffold776	Augus-PASA	exon	55796	55891	.	-	.	ID=Dca55589.1.exon9;Parent=Dca55589.1