Carnation DB

Dca55591.1

Annotation

12-exons
f-1
sp|B9HY74_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1089236#unknown#0F0P0C
Os05t0395300-01 Cystathionine beta-synthase, core domain containing protein.
Repeat List (scaffold776)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55591.1	1	445	445	74.15	445	68	4e-172
Target_name	Start	End	Length	Cov(%)
sp\|B9HY74_POPTR	1	488	502	97.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55591.1	1	439	445	71.68	439	66	2e-161
Target_name	Start	End	Length	Cov(%)
AT4G14240.1	1	478	494	96.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold776	Augustus	mRNA	90117	97619	.	+	.	ID=Dca55591.1;Parent=Dca55591
scaffold776	Augustus	exon	90117	90351	.	+	.	ID=Dca55591.1.exon1;Parent=Dca55591.1
scaffold776	Augustus	exon	91577	91653	.	+	.	ID=Dca55591.1.exon2;Parent=Dca55591.1
scaffold776	Augustus	exon	92380	92463	.	+	.	ID=Dca55591.1.exon3;Parent=Dca55591.1
scaffold776	Augustus	exon	93160	93243	.	+	.	ID=Dca55591.1.exon4;Parent=Dca55591.1
scaffold776	Augustus	exon	93369	93440	.	+	.	ID=Dca55591.1.exon5;Parent=Dca55591.1
scaffold776	Augustus	exon	94020	94087	.	+	.	ID=Dca55591.1.exon6;Parent=Dca55591.1
scaffold776	Augustus	exon	95973	96060	.	+	.	ID=Dca55591.1.exon7;Parent=Dca55591.1
scaffold776	Augustus	exon	96178	96251	.	+	.	ID=Dca55591.1.exon8;Parent=Dca55591.1
scaffold776	Augustus	exon	96557	96908	.	+	.	ID=Dca55591.1.exon9;Parent=Dca55591.1
scaffold776	Augustus	exon	96994	97040	.	+	.	ID=Dca55591.1.exon10;Parent=Dca55591.1
scaffold776	Augustus	exon	97129	97210	.	+	.	ID=Dca55591.1.exon11;Parent=Dca55591.1
scaffold776	Augustus	exon	97545	97619	.	+	.	ID=Dca55591.1.exon12;Parent=Dca55591.1