Carnation DB

Dca55710.1

Annotation

6-exons
f-1
sp|F6HQ00_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0104g01580#GO:0005634;GO:0043565;GO:0003700;GO:0006351#2F1P1C
sp|B9S3T8_RICCO#Homeobox protein LUMINIDEPENDENS, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0555290#GO:0005634;GO:0043565;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold78)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55710.1	4	291	326	61.34	288	70	2e-115
Target_name	Start	End	Length	Cov(%)
sp\|F6HQ00_VITVI	3	289	1078	26.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55710.1	5	290	326	54.29	286	61	8e-98
Target_name	Start	End	Length	Cov(%)
AT4G02560.1	1	291	953	30.53

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold78	Augustus	mRNA	54150	56018	.	-	.	ID=Dca55710.1;Parent=Dca55710
scaffold78	Augustus	exon	54150	54347	.	-	.	ID=Dca55710.1.exon1;Parent=Dca55710.1
scaffold78	Augustus	exon	54433	54526	.	-	.	ID=Dca55710.1.exon2;Parent=Dca55710.1
scaffold78	Augustus	exon	54625	54977	.	-	.	ID=Dca55710.1.exon3;Parent=Dca55710.1
scaffold78	Augustus	exon	55069	55199	.	-	.	ID=Dca55710.1.exon4;Parent=Dca55710.1
scaffold78	Augustus	exon	55680	55707	.	-	.	ID=Dca55710.1.exon5;Parent=Dca55710.1
scaffold78	Augustus	exon	55842	56018	.	-	.	ID=Dca55710.1.exon6;Parent=Dca55710.1