Carnation DB

Dca55869.1

Annotation

6-exons
f-2
sp|D7T260_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0022g01280#GO:0046872;GO:0004222;GO:0006508#2F1P0C
sp|B9R9Q2_RICCO#Mitochondrial intermediate peptidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1499960#GO:0046872;GO:0004222;GO:0006508#2F1P0C
Repeat List (scaffold784)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55869.1	1	218	289	60.2	218	80	6e-102
Target_name	Start	End	Length	Cov(%)
sp\|D7T260_VITVI	23	240	274	79.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55869.1	1	234	289	58.82	234	71	3e-100
Target_name	Start	End	Length	Cov(%)
AT5G51540.1	465	706	706	34.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold784	Augustus	mRNA	1	1608	.	+	.	ID=Dca55869.1;Parent=Dca55869
scaffold784	Augustus	exon	1	121	.	+	.	ID=Dca55869.1.exon1;Parent=Dca55869.1
scaffold784	Augustus	exon	205	272	.	+	.	ID=Dca55869.1.exon2;Parent=Dca55869.1
scaffold784	Augustus	exon	625	760	.	+	.	ID=Dca55869.1.exon3;Parent=Dca55869.1
scaffold784	Augustus	exon	877	1042	.	+	.	ID=Dca55869.1.exon4;Parent=Dca55869.1
scaffold784	Augustus	exon	1145	1308	.	+	.	ID=Dca55869.1.exon5;Parent=Dca55869.1
scaffold784	Augustus	exon	1393	1608	.	+	.	ID=Dca55869.1.exon6;Parent=Dca55869.1