Dca55964.1
Annotation
- 2-exons
- f-1
- sp|Q5MG92_IPOBA#Putative retrotransposon polyprotein#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold7868)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55964.1 |
118 |
423 |
423 |
44.91 |
306 |
54 |
1e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5MG92_IPOBA |
433 |
786 |
1358 |
26.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55964.1 |
227 |
423 |
423 |
19.38 |
197 |
41 |
3e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
179 |
374 |
707 |
27.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7868 |
Augustus |
mRNA |
1 |
2160 |
. |
- |
. |
ID=Dca55964.1;Parent=Dca55964 |
| scaffold7868 |
Augustus |
exon |
1 |
931 |
. |
- |
. |
ID=Dca55964.1.exon1;Parent=Dca55964.1 |
| scaffold7868 |
Augustus |
exon |
1822 |
2160 |
. |
- |
. |
ID=Dca55964.1.exon2;Parent=Dca55964.1 |
