Dca55970.1
Annotation
- 3-exons
- f-1
- sp|Q10HF0_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g39400#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold787)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55970.1 |
36 |
207 |
227 |
32.59 |
172 |
43 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10HF0_ORYSJ |
166 |
338 |
1073 |
16.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold787 |
Augustus |
mRNA |
6344 |
9537 |
. |
- |
. |
ID=Dca55970.1;Parent=Dca55970 |
| scaffold787 |
Augustus |
exon |
6344 |
6372 |
. |
- |
. |
ID=Dca55970.1.exon1;Parent=Dca55970.1 |
| scaffold787 |
Augustus |
exon |
8718 |
9286 |
. |
- |
. |
ID=Dca55970.1.exon2;Parent=Dca55970.1 |
| scaffold787 |
Augustus |
exon |
9452 |
9537 |
. |
- |
. |
ID=Dca55970.1.exon3;Parent=Dca55970.1 |
