Dca56019.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7887)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56019.1 |
368 |
514 |
520 |
18.46 |
147 |
66 |
2e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
208 |
354 |
964 |
15.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56019.1 |
368 |
512 |
520 |
12.69 |
145 |
45 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
622 |
769 |
1428 |
10.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7887 |
Augustus |
mRNA |
10010 |
19979 |
. |
+ |
. |
ID=Dca56019.1;Parent=Dca56019 |
| scaffold7887 |
Augustus |
exon |
10010 |
11114 |
. |
+ |
. |
ID=Dca56019.1.exon1;Parent=Dca56019.1 |
| scaffold7887 |
Augustus |
exon |
19522 |
19979 |
. |
+ |
. |
ID=Dca56019.1.exon2;Parent=Dca56019.1 |
