Dca56044.1
Annotation
- 3-exons
- f-3
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold7898)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56044.1 |
5 |
598 |
643 |
36.23 |
594 |
34 |
1e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
394 |
1074 |
1110 |
61.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56044.1 |
335 |
474 |
643 |
6.84 |
140 |
31 |
7e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
699 |
841 |
857 |
16.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7898 |
Augustus |
mRNA |
58 |
2241 |
. |
+ |
. |
ID=Dca56044.1;Parent=Dca56044 |
| scaffold7898 |
Augustus |
exon |
58 |
1041 |
. |
+ |
. |
ID=Dca56044.1.exon1;Parent=Dca56044.1 |
| scaffold7898 |
Augustus |
exon |
1221 |
1672 |
. |
+ |
. |
ID=Dca56044.1.exon2;Parent=Dca56044.1 |
| scaffold7898 |
Augustus |
exon |
1744 |
2241 |
. |
+ |
. |
ID=Dca56044.1.exon3;Parent=Dca56044.1 |
