Carnation DB

Dca56139.1

Annotation

8-exons
f-1
sp|B9HMB9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721032#unknown#0F0P0C
sp|B9T5M6_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0331180#GO:0000785;GO:0005634;GO:0003677;GO:0006355#1F1P2C
Repeat List (scaffold791)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56139.1	1	326	326	52.76	326	45	3e-83
Target_name	Start	End	Length	Cov(%)
sp\|B9HMB9_POPTR	60	436	437	86.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56139.1	1	314	326	49.69	314	43	1e-74
Target_name	Start	End	Length	Cov(%)
AT1G19485.1	437	805	815	45.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold791	Augustus	mRNA	110993	116758	.	+	.	ID=Dca56139.1;Parent=Dca56139
scaffold791	Augustus	exon	110993	111064	.	+	.	ID=Dca56139.1.exon1;Parent=Dca56139.1
scaffold791	Augustus	exon	111474	111513	.	+	.	ID=Dca56139.1.exon2;Parent=Dca56139.1
scaffold791	Augustus	exon	111701	111773	.	+	.	ID=Dca56139.1.exon3;Parent=Dca56139.1
scaffold791	Augustus	exon	112926	112991	.	+	.	ID=Dca56139.1.exon4;Parent=Dca56139.1
scaffold791	Augustus	exon	113246	113349	.	+	.	ID=Dca56139.1.exon5;Parent=Dca56139.1
scaffold791	Augustus	exon	115420	115466	.	+	.	ID=Dca56139.1.exon6;Parent=Dca56139.1
scaffold791	Augustus	exon	115866	116121	.	+	.	ID=Dca56139.1.exon7;Parent=Dca56139.1
scaffold791	Augustus	exon	116436	116758	.	+	.	ID=Dca56139.1.exon8;Parent=Dca56139.1