Dca56339.1
Annotation
- 3-exons
- f-1
- sp|A5C7C1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032575#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold7973)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56339.1 |
49 |
220 |
576 |
14.23 |
172 |
48 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C7C1_VITVI |
1 |
161 |
962 |
16.73 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56339.1 |
56 |
211 |
576 |
9.37 |
156 |
35 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
7 |
161 |
591 |
26.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7973 |
Augustus |
mRNA |
6662 |
9869 |
. |
+ |
. |
ID=Dca56339.1;Parent=Dca56339 |
| scaffold7973 |
Augustus |
exon |
6662 |
7321 |
. |
+ |
. |
ID=Dca56339.1.exon1;Parent=Dca56339.1 |
| scaffold7973 |
Augustus |
exon |
8667 |
9433 |
. |
+ |
. |
ID=Dca56339.1.exon2;Parent=Dca56339.1 |
| scaffold7973 |
Augustus |
exon |
9566 |
9869 |
. |
+ |
. |
ID=Dca56339.1.exon3;Parent=Dca56339.1 |
