Carnation DB

Dca56448.1

Annotation

6-exons
f-1
sp|B9GQM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_799475#GO:0016021;GO:0046923;GO:0006621#1F1P1C
AT3G25160.1 | Symbols: | ER lumen protein retaining receptor family protein | chr3:9160337-9162023 REVERSE LENGTH=272
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56448.1	2	269	272	54.77	268	56	4e-82
Target_name	Start	End	Length	Cov(%)
sp\|B9GQM3_POPTR	3	270	271	98.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56448.1	6	269	272	51.83	264	54	2e-82
Target_name	Start	End	Length	Cov(%)
AT3G25160.1	8	271	272	97.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augustus	mRNA	271358	273274	.	+	.	ID=Dca56448.1;Parent=Dca56448
scaffold8	Augustus	exon	271358	271580	.	+	.	ID=Dca56448.1.exon1;Parent=Dca56448.1
scaffold8	Augustus	exon	272318	272517	.	+	.	ID=Dca56448.1.exon2;Parent=Dca56448.1
scaffold8	Augustus	exon	272600	272740	.	+	.	ID=Dca56448.1.exon3;Parent=Dca56448.1
scaffold8	Augustus	exon	272835	272915	.	+	.	ID=Dca56448.1.exon4;Parent=Dca56448.1
scaffold8	Augustus	exon	273013	273140	.	+	.	ID=Dca56448.1.exon5;Parent=Dca56448.1
scaffold8	Augustus	exon	273229	273274	.	+	.	ID=Dca56448.1.exon6;Parent=Dca56448.1