Dca56499.1
Annotation
- 2-exons
- f-1
- sp|Q9LGZ8_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56499.1 |
4 |
230 |
264 |
32.95 |
227 |
39 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LGZ8_ARATH |
12 |
233 |
1098 |
20.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56499.1 |
4 |
208 |
264 |
26.89 |
205 |
33 |
8e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
16 |
225 |
237 |
88.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8 |
Augustus |
mRNA |
554150 |
555038 |
. |
+ |
. |
ID=Dca56499.1;Parent=Dca56499 |
| scaffold8 |
Augustus |
exon |
554150 |
554157 |
. |
+ |
. |
ID=Dca56499.1.exon1;Parent=Dca56499.1 |
| scaffold8 |
Augustus |
exon |
554252 |
555038 |
. |
+ |
. |
ID=Dca56499.1.exon2;Parent=Dca56499.1 |
