Carnation DB

Dca56522.1

Annotation

7-exons
f-1
sp|D7U393_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04590#GO:0005488#1F0P0C
AT1G04130.1 | Symbols: TPR2, AtTPR2 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1073465-1075374 FORWARD LENGTH=360
Repeat List (scaffold8)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56522.1	1	307	309	64.72	307	56	5e-105
Target_name	Start	End	Length	Cov(%)
sp\|D7U393_VITVI	1	362	364	99.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56522.1	1	306	309	62.45	306	55	6e-102
Target_name	Start	End	Length	Cov(%)
AT1G04130.1	1	357	360	99.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8	Augustus	mRNA	740691	743496	.	-	.	ID=Dca56522.1;Parent=Dca56522
scaffold8	Augustus	exon	740691	740764	.	-	.	ID=Dca56522.1.exon1;Parent=Dca56522.1
scaffold8	Augustus	exon	740931	741023	.	-	.	ID=Dca56522.1.exon2;Parent=Dca56522.1
scaffold8	Augustus	exon	741299	741416	.	-	.	ID=Dca56522.1.exon3;Parent=Dca56522.1
scaffold8	Augustus	exon	742079	742213	.	-	.	ID=Dca56522.1.exon4;Parent=Dca56522.1
scaffold8	Augustus	exon	742302	742493	.	-	.	ID=Dca56522.1.exon5;Parent=Dca56522.1
scaffold8	Augustus	exon	742610	742822	.	-	.	ID=Dca56522.1.exon6;Parent=Dca56522.1
scaffold8	Augustus	exon	743392	743496	.	-	.	ID=Dca56522.1.exon7;Parent=Dca56522.1