Carnation DB

Dca56523.1

Annotation

5-exons
f-1
sp|B9T6Z8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1143360#unknown#0F0P0C
AT1G23230.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:8244481-8251741 FORWARD LENGTH=1615
Repeat List (scaffold80)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56523.1	8	359	367	65.12	352	59	1e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9T6Z8_RICCO	2	412	1613	25.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56523.1	8	359	367	57.22	352	53	2e-111
Target_name	Start	End	Length	Cov(%)
AT1G23230.1	2	397	1615	24.52

seqname	source	feature	start	end	score	strand	frame	group
scaffold80	Augustus	mRNA	982	4120	.	-	.	ID=Dca56523.1;Parent=Dca56523
scaffold80	Augustus	exon	982	1670	.	-	.	ID=Dca56523.1.exon1;Parent=Dca56523.1
scaffold80	Augustus	exon	1785	1932	.	-	.	ID=Dca56523.1.exon2;Parent=Dca56523.1
scaffold80	Augustus	exon	2112	2208	.	-	.	ID=Dca56523.1.exon3;Parent=Dca56523.1
scaffold80	Augustus	exon	3855	3898	.	-	.	ID=Dca56523.1.exon4;Parent=Dca56523.1
scaffold80	Augustus	exon	3995	4120	.	-	.	ID=Dca56523.1.exon5;Parent=Dca56523.1