Carnation DB

Dca56551.1

Annotation

9-exons
f-1
sp|D7U4C7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g01490#GO:0016624#1F0P0C
Os12t0183100-01 Similar to Branched chain alpha-keto acid dehydrogenase E1-alpha subunit (Fragment).
Repeat List (scaffold80)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56551.1	3	441	442	68.55	439	69	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U4C7_VITVI	40	479	481	91.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56551.1	24	439	442	64.47	416	68	2e-176
Target_name	Start	End	Length	Cov(%)
Os12t0183100-01	62	483	487	86.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold80	Augustus	mRNA	176536	179249	.	-	.	ID=Dca56551.1;Parent=Dca56551
scaffold80	Augustus	exon	176536	176703	.	-	.	ID=Dca56551.1.exon1;Parent=Dca56551.1
scaffold80	Augustus	exon	176840	177025	.	-	.	ID=Dca56551.1.exon2;Parent=Dca56551.1
scaffold80	Augustus	exon	177235	177374	.	-	.	ID=Dca56551.1.exon3;Parent=Dca56551.1
scaffold80	Augustus	exon	177457	177568	.	-	.	ID=Dca56551.1.exon4;Parent=Dca56551.1
scaffold80	Augustus	exon	177656	177755	.	-	.	ID=Dca56551.1.exon5;Parent=Dca56551.1
scaffold80	Augustus	exon	177884	178041	.	-	.	ID=Dca56551.1.exon6;Parent=Dca56551.1
scaffold80	Augustus	exon	178303	178485	.	-	.	ID=Dca56551.1.exon7;Parent=Dca56551.1
scaffold80	Augustus	exon	178769	178903	.	-	.	ID=Dca56551.1.exon8;Parent=Dca56551.1
scaffold80	Augustus	exon	179103	179249	.	-	.	ID=Dca56551.1.exon9;Parent=Dca56551.1