Carnation DB

Dca56563.1

Annotation

8-exons
f-1
sp|G5DWW5_SILLA#Transcription elongation factor (TFIIS) family protein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0005634;GO:0003677;GO:0003746;GO:0006351#2F1P1C
Repeat List (scaffold80)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56563.1	142	401	403	43.42	260	68	1e-92
Target_name	Start	End	Length	Cov(%)
sp\|G5DWW5_SILLA	56	277	278	79.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56563.1	1	403	403	44.66	403	44	1e-71
Target_name	Start	End	Length	Cov(%)
AT5G09850.1	1	352	353	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold80	Augus-PASA	mRNA	269909	272612	.	-	.	ID=Dca56563.1;Parent=Dca56563
scaffold80	Augus-PASA	exon	269909	270015	.	-	.	ID=Dca56563.1.exon1;Parent=Dca56563.1
scaffold80	Augus-PASA	exon	270178	270262	.	-	.	ID=Dca56563.1.exon2;Parent=Dca56563.1
scaffold80	Augus-PASA	exon	270677	270807	.	-	.	ID=Dca56563.1.exon3;Parent=Dca56563.1
scaffold80	Augus-PASA	exon	270917	270950	.	-	.	ID=Dca56563.1.exon4;Parent=Dca56563.1
scaffold80	Augustus	exon	271341	271575	.	-	.	ID=Dca56563.1.exon5;Parent=Dca56563.1
scaffold80	Augus-PASA	exon	271690	271772	.	-	.	ID=Dca56563.1.exon6;Parent=Dca56563.1
scaffold80	Augus-PASA	exon	271887	271955	.	-	.	ID=Dca56563.1.exon7;Parent=Dca56563.1
scaffold80	Augustus	exon	272145	272612	.	-	.	ID=Dca56563.1.exon8;Parent=Dca56563.1