Carnation DB

Dca56730.1

Annotation

6-exons
f-1
sp|D7MQL4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_496610#unknown#0F0P0C
sp|Q93Z49_ARATH#AT5g64130/MHJ24_11#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g64130#unknown#0F0P0C
Repeat List (scaffold805)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56730.1	1	110	117	73.5	110	77	1e-41
Target_name	Start	End	Length	Cov(%)
sp\|D7MQL4_ARALL	1	113	118	95.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56730.1	1	110	117	73.5	110	64	7e-39
Target_name	Start	End	Length	Cov(%)
AT5G64130.3	1	135	140	96.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold805	Augus-PASA	mRNA	37567	39712	.	+	.	ID=Dca56730.1;Parent=Dca56730
scaffold805	Augus-PASA	exon	37567	37650	.	+	.	ID=Dca56730.1.exon1;Parent=Dca56730.1
scaffold805	Augus-PASA	exon	37850	37912	.	+	.	ID=Dca56730.1.exon2;Parent=Dca56730.1
scaffold805	Augus-PASA	exon	38256	38303	.	+	.	ID=Dca56730.1.exon3;Parent=Dca56730.1
scaffold805	Augus-PASA	exon	38405	38458	.	+	.	ID=Dca56730.1.exon4;Parent=Dca56730.1
scaffold805	Augus-PASA	exon	39508	39565	.	+	.	ID=Dca56730.1.exon5;Parent=Dca56730.1
scaffold805	Augus-PASA	exon	39666	39712	.	+	.	ID=Dca56730.1.exon6;Parent=Dca56730.1