Dca56761.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold806)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56761.1 |
1 |
462 |
462 |
59.95 |
462 |
60 |
2e-154
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
151 |
600 |
964 |
46.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56761.1 |
8 |
462 |
462 |
36.36 |
455 |
35 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
555 |
1044 |
1401 |
34.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold806 |
Augustus |
mRNA |
17307 |
18751 |
. |
+ |
. |
ID=Dca56761.1;Parent=Dca56761 |
| scaffold806 |
Augustus |
exon |
17307 |
18133 |
. |
+ |
. |
ID=Dca56761.1.exon1;Parent=Dca56761.1 |
| scaffold806 |
Augustus |
exon |
18190 |
18751 |
. |
+ |
. |
ID=Dca56761.1.exon2;Parent=Dca56761.1 |
