Carnation DB

Dca56784.1

Annotation

5-exons
f-1
sp|Q0KIP3_SOLDE#Polyprotein, 3'-partial, putative#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00005#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold8068)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56784.1	127	661	664	50.6	535	59	0
Target_name	Start	End	Length	Cov(%)
sp\|Q0KIP3_SOLDE	645	1214	1475	38.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56784.1	129	664	664	31.77	536	38	6e-99
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	562	1091	1539	34.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8068	Augustus	mRNA	6544	12279	.	+	.	ID=Dca56784.1;Parent=Dca56784
scaffold8068	Augustus	exon	6544	6716	.	+	.	ID=Dca56784.1.exon1;Parent=Dca56784.1
scaffold8068	Augustus	exon	9092	9247	.	+	.	ID=Dca56784.1.exon2;Parent=Dca56784.1
scaffold8068	Augustus	exon	9924	10815	.	+	.	ID=Dca56784.1.exon3;Parent=Dca56784.1
scaffold8068	Augustus	exon	10903	11675	.	+	.	ID=Dca56784.1.exon4;Parent=Dca56784.1
scaffold8068	Augustus	exon	11841	12279	.	+	.	ID=Dca56784.1.exon5;Parent=Dca56784.1