Carnation DB

Dca56899.1

Annotation

6-exons
f-1
sp|F6HJC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g01800#GO:0003676;GO:0000166#2F0P0C
sp|B9SM97_RICCO#mRNA splicing factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0297330#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold81)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56899.1	1	208	241	68.87	208	78	3e-92
Target_name	Start	End	Length	Cov(%)
sp\|F6HJC7_VITVI	1	214	545	39.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56899.1	2	207	241	61.82	206	70	6e-82
Target_name	Start	End	Length	Cov(%)
AT1G71800.1	3	212	461	45.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold81	Augustus	mRNA	218206	220529	.	-	.	ID=Dca56899.1;Parent=Dca56899
scaffold81	Augustus	exon	218206	218385	.	-	.	ID=Dca56899.1.exon1;Parent=Dca56899.1
scaffold81	Augustus	exon	218478	218701	.	-	.	ID=Dca56899.1.exon2;Parent=Dca56899.1
scaffold81	Augustus	exon	218789	218822	.	-	.	ID=Dca56899.1.exon3;Parent=Dca56899.1
scaffold81	Augustus	exon	219225	219399	.	-	.	ID=Dca56899.1.exon4;Parent=Dca56899.1
scaffold81	Augustus	exon	220285	220363	.	-	.	ID=Dca56899.1.exon5;Parent=Dca56899.1
scaffold81	Augustus	exon	220496	220529	.	-	.	ID=Dca56899.1.exon6;Parent=Dca56899.1