Carnation DB

Dca56970.1

Annotation

6-exons
f-1
sp|B9RSX1_RICCO#Serine/arginine rich splicing factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0679140#GO:0000786;GO:0005634;GO:0003677;GO:0000166;GO:0007283#2F1P2C
Repeat List (scaffold8116)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56970.1	40	171	364	26.09	132	70	5e-47
Target_name	Start	End	Length	Cov(%)
sp\|B9RSX1_RICCO	45	180	257	52.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56970.1	27	149	364	21.42	123	62	6e-40
Target_name	Start	End	Length	Cov(%)
AT5G18810.1	24	149	236	53.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8116	Augustus	mRNA	2361	10188	.	-	.	ID=Dca56970.1;Parent=Dca56970
scaffold8116	Augustus	exon	2361	2943	.	-	.	ID=Dca56970.1.exon1;Parent=Dca56970.1
scaffold8116	Augus-PASA	exon	5303	5342	.	-	.	ID=Dca56970.1.exon2;Parent=Dca56970.1
scaffold8116	Augus-PASA	exon	5455	5507	.	-	.	ID=Dca56970.1.exon3;Parent=Dca56970.1
scaffold8116	Augus-PASA	exon	5646	5810	.	-	.	ID=Dca56970.1.exon4;Parent=Dca56970.1
scaffold8116	Augus-PASA	exon	8148	8225	.	-	.	ID=Dca56970.1.exon5;Parent=Dca56970.1
scaffold8116	Augus-PASA	exon	10013	10188	.	-	.	ID=Dca56970.1.exon6;Parent=Dca56970.1